Insertion junction: LMJ.RY0402.090143_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.090143
Chromosome:chromosome 1
Location:6605681
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g047265 PHC52 (1 of 1) IPR000772//IPR003882//IPR024616 - Ricin B, lectin domain // Pistil-specific extensin-like protein // Pherophorin; Pherophorin-chlamydomonas homolog 52 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGTTGAGAGTCGCGGGTTGAAACAGGTT
Internal bar code:GGGGGATGGCGTCGTGTCGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1245
LEAP-Seq percent confirming:99.8203
LEAP-Seq n confirming:6111
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGGTTGGTTGCCTATTCG
Suggested primer 2:GACAGTGCGCATGGTATTTG