Insertion junction: LMJ.RY0402.090472_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.090472
Chromosome:chromosome 12
Location:5774727
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre12.g533250 (1 of 2) IPR000104//IPR001394//IPR028889 - Antifreeze protein, type I // Peptidase C19, ubiquitin carboxyl-terminal hydrolase // Ubiquitin specific protease domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTCGTGCTGCTGCTTGCCCTGTGGGTGG
Internal bar code:TGCTATGCCCCTGTGGCCCCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:239
LEAP-Seq percent confirming:49.4382
LEAP-Seq n confirming:220
LEAP-Seq n nonconfirming:225
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:AGTAGCAGCAGGAGAGGCTG
Suggested primer 2:CCGTGTGTGTGTGTGTGTGT