Insertion junction: LMJ.RY0402.090499_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.090499
Chromosome:chromosome 16
Location:1147444
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre16.g650300 HTR39,HTR25 Histone H3; (1 of 35) K11253 - histone H3 (H3) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCCCCTGAAGAATCCAACCGGTATCGCG
Internal bar code:TAAACGACACGCTCGCAAGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:386
LEAP-Seq percent confirming:99.4318
LEAP-Seq n confirming:9275
LEAP-Seq n nonconfirming:53
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCGAGGACACCAACCTGT
Suggested primer 2:CCCAGAAGCTGTCCAGTAGC