Insertion junction: LMJ.RY0402.090501_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.090501
Chromosome:chromosome 16
Location:5500896
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g680700 (1 of 4) 6.3.5.4 - Asparagine synthase (glutamine-hydrolyzing) / Glutamine-dependent asparagine synthetase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGTCCCCAGTCGCAGGGGGTGTAAAGCT
Internal bar code:ACGGAGATTCGCGAGGTTTAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:685
LEAP-Seq percent confirming:99.0893
LEAP-Seq n confirming:3808
LEAP-Seq n nonconfirming:35
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGGTGAGGCTGAAAGTCG
Suggested primer 2:AGCAGTTGGAGGAGCAAAAA