Insertion junction: LMJ.RY0402.090698_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.090698
Chromosome:chromosome 9
Location:5853624
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g402293 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGAGTATGGGTTTTGCGCACGGGAGGAG
Internal bar code:ACTAAATTTGAGGTGCGAATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:623
LEAP-Seq percent confirming:96.9231
LEAP-Seq n confirming:189
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGCGCTTATGCGATCTA
Suggested primer 2:GCACATGCAACACCGTATTC