Insertion junction: LMJ.RY0402.090776_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.090776
Chromosome:chromosome 17
Location:2593828
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre17.g716900 (1 of 1) IPR002104//IPR010998//IPR011010 - Integrase, catalytic domain // Integrase, Lambda-type, N-terminal // DNA breaking-rejoining enzyme, catalytic core 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGCTTGTATAGATAGCAATAAAATGAGT
Internal bar code:CTAGAAGTGCCCGTAGCTGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:343
LEAP-Seq percent confirming:69.2
LEAP-Seq n confirming:173
LEAP-Seq n nonconfirming:77
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GTGATGTCGTTGATGATGCC
Suggested primer 2:GGCGTAGCCAGCAAGTATTC