Insertion junction: LMJ.RY0402.090778_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.090778
Chromosome:scaffold 24
Location:63022
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre24.g755597 Chlorophyll a /Pheophorbide a oxygenase-related protein; (1 of 2) 1.14.13.122 - Chlorophyllide-a oxygenase / Cholorophyll-b synthase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGACTGGGGAAGGAGAGGAGAGGAAAGC
Internal bar code:GTGATACACTTGGATCAGATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:735
LEAP-Seq percent confirming:99.5635
LEAP-Seq n confirming:8440
LEAP-Seq n nonconfirming:37
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGGAGGAGGGTAGGAGTG
Suggested primer 2:CAAATCCATGATGAACAGCG