Insertion junction: LMJ.RY0402.090916_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.090916
Chromosome:chromosome 1
Location:6367500
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g045400 TNP7 intron|outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAGTTTACGCGCAGCTCACACAAGGCTTC
Internal bar code:AGGGAGAAAGACGCAGGATATC

Confirmation - LEAP-Seq

LEAP-Seq distance:594
LEAP-Seq percent confirming:99.4404
LEAP-Seq n confirming:1244
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GCATCTCTAAAGTCTGCGGG
Suggested primer 2:GGCGCGTGTGAGTATGTAGA