Insertion junction: LMJ.RY0402.090990_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.090990
Chromosome:chromosome 16
Location:1130875
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g650050 (1 of 2) PTHR12231//PTHR12231:SF112 - CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN // RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 14, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTTGTCGTTCTTGGTTGGCTCCAGGGAG
Internal bar code:AGTTTCAGGCCCGGTGCCCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:520
LEAP-Seq percent confirming:98.8799
LEAP-Seq n confirming:3178
LEAP-Seq n nonconfirming:36
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GTAAAGGCGTGATCGGTGTT
Suggested primer 2:AAAGATGGGGAGTGTTGCAC