Insertion junction: LMJ.RY0402.091008_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.091008
Chromosome:chromosome 12
Location:7658236
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre12.g554450 3'UTR|intron|outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCACTCGGCGCTGTCAGCAGCAGCGGTG
Internal bar code:ATATTAGTGGCTTCTCCGCAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:484
LEAP-Seq percent confirming:94.0
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCGCATAAAACCAAAAGG
Suggested primer 2:ATGAGGCTTACGTGTTTGGG