Insertion junction: LMJ.RY0402.091066_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.091066
Chromosome:chromosome 3
Location:8478441
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g200431 (1 of 1) IPR001356//IPR009057//IPR023214 - Homeobox domain // Homeodomain-like // HAD-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGCGAGGGTCAGCGGGTAGCTTCACCTA
Internal bar code:TATCGGAGCCCGCACCGGGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:266
LEAP-Seq percent confirming:96.8992
LEAP-Seq n confirming:125
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTTACCCTCAGCACCCAC
Suggested primer 2:AGAACCCAACAGGTGCAATC