Insertion junction: LMJ.RY0402.091232_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.091232
Chromosome:chromosome 2
Location:1901961
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre02.g087700 APX1 (1 of 1) PTHR31356//PTHR31356:SF1 - FAMILY NOT NAMED // L-ASCORBATE PEROXIDASE S, CHLOROPLASTIC/MITOCHONDRIAL-RELATED; Ascorbate peroxidase 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGTGCCGTACTGCGGACCGCTACTGCAT
Internal bar code:GCGAGTACTGATATACGTTAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:856
LEAP-Seq percent confirming:95.5975
LEAP-Seq n confirming:152
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AGACCCATGCGGTAGAACAC
Suggested primer 2:CGGTGGCAACTTAAGGGTTA