Insertion junction: LMJ.RY0402.091448_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.091448
Chromosome:chromosome 4
Location:2373607
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre04.g221050 (1 of 3) PTHR12136//PTHR12136:SF47 - STEROIDOGENIC ACUTE REGULATORY PROTEIN STAR // STEROIDOGENIC ACUTE REGULATORY-LIKE PROTEIN 1 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGCCCCACTACTACGTGACCCCAGCCCG
Internal bar code:GCGTGATGTCGCAACGGGGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:486
LEAP-Seq percent confirming:94.5174
LEAP-Seq n confirming:4534
LEAP-Seq n nonconfirming:263
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGGGGTTTGAATTTGGGT
Suggested primer 2:TAGCGGCTGAGCTAGCTTTC