Insertion junction: LMJ.RY0402.091714_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.091714
Chromosome:chromosome 3
Location:7295332
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g206950 (1 of 1) PF05183 - RNA dependent RNA polymerase (RdRP) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATGCAGGAAACGTTTCACACCAAAAGGG
Internal bar code:ATTGGGGTATTGGTATCCGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:421
LEAP-Seq percent confirming:98.8701
LEAP-Seq n confirming:700
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGCGTTGTTGCTTGACAG
Suggested primer 2:TTCAGTCGCATGGTGTCATT