Insertion junction: LMJ.RY0402.091785_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.091785
Chromosome:chromosome 16
Location:1109133
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre16.g649800 PPR3,CYCR6 (1 of 1) PF02984//PF13041 - Cyclin, C-terminal domain (Cyclin_C) // PPR repeat family (PPR_2); PentatricoPeptide Repeat protein 3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCGCGGCGTCGTGGTCGCTCTCCTCGTCT
Internal bar code:GGCGTACAGACATCGGGCCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1
LEAP-Seq percent confirming:40.1538
LEAP-Seq n confirming:940
LEAP-Seq n nonconfirming:1401
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCCTGGGTCTCAGTTTCT
Suggested primer 2:CTGGCTTAGTTTCTGTCGCC