Insertion junction: LMJ.RY0402.091792_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.091792
Chromosome:chromosome 4
Location:2849335
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre04.g224300 CGL84 (1 of 22) PTHR10994 - RETICULON; Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCATGATCAGATCAACCCACGAACCGCT
Internal bar code:ACTTGAACGGACGTCCATCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:740
LEAP-Seq percent confirming:99.2149
LEAP-Seq n confirming:3033
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TAAGCTTGCAGTGGCATCAC
Suggested primer 2:CGTCATTTCCAACCAGACCT