Insertion junction: LMJ.RY0402.091825_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.091825
Chromosome:chromosome 4
Location:3974333
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre04.g231614 (1 of 1) IPR001611//IPR003591//IPR023353 - Leucine-rich repeat // Leucine-rich repeat, typical subtype // LemA-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACGCGTCACTGCCGCTGCCACCGCCCTGC
Internal bar code:ATAGGGTAGTAACGCAGGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:346
LEAP-Seq percent confirming:99.7557
LEAP-Seq n confirming:3675
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGTACGAGATGACAGGAG
Suggested primer 2:GGACAGTGTGGATCATCGTG