Insertion junction: LMJ.RY0402.091868_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.091868
Chromosome:chromosome 3
Location:8486383
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g200655 DEG4 (1 of 1) 3.2.1.55 - Non-reducing end alpha-L-arabinofuranosidase / Arabinosidase; DegP protease and Glycoside hydrolase family 3 protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGCATTGGGAGCAAGGGGGCGGGCGAGG
Internal bar code:TGTCTGCGGCCGCGTTGGCGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:139
LEAP-Seq percent confirming:93.2455
LEAP-Seq n confirming:566
LEAP-Seq n nonconfirming:41
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:AAGACACCCCCTCCACTTCT
Suggested primer 2:TGTTGATGGATGAGGACGAG