Insertion junction: LMJ.RY0402.091874_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.091874
Chromosome:chromosome 17
Location:5029323
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g734757 TET5 (1 of 12) PF12851 - Oxygenase domain of the 2OGFeDO superfamily (Tet_JBP); {"non-canonical TET-dioxygenase, putative 5-methylcytosine-modifying enzyme 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATTGCACTCGCTGCCTCCTGTCCATTCC
Internal bar code:AGCTGTGTTTCGGCGCGCTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:559
LEAP-Seq percent confirming:99.0132
LEAP-Seq n confirming:6321
LEAP-Seq n nonconfirming:63
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAGCGGGTGGGTAGTAGT
Suggested primer 2:ATCACCCAACCAGTTTGCTC