Insertion junction: LMJ.RY0402.092112_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.092112
Chromosome:chromosome 3
Location:3561486
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g168100 (1 of 781) IPR000104 - Antifreeze protein, type I 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCTCGACGAACCCCCCTTGGCATGCCGC
Internal bar code:AATGCGTGAGGGGGGGGCTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:479
LEAP-Seq percent confirming:85.7667
LEAP-Seq n confirming:5140
LEAP-Seq n nonconfirming:853
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CGTAGCTGCAGTACCGTTCA
Suggested primer 2:CGACAGACCCCAAAAACCTA