Insertion junction: LMJ.RY0402.092327_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.092327
Chromosome:chromosome 6
Location:3164657
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre06.g275500 (1 of 4) IPR000104//IPR001471//IPR016177 - Antifreeze protein, type I // AP2/ERF domain // DNA-binding domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAAACACATTCTTGCACACGCTTCCAGCT
Internal bar code:CCGTCTTGTCGTCTTCGTTGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:577
LEAP-Seq percent confirming:99.1736
LEAP-Seq n confirming:9241
LEAP-Seq n nonconfirming:77
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTAACATCGGACACTGCT
Suggested primer 2:TGGAGACTGTGAGGCTGTTG