Insertion junction: LMJ.RY0402.092528_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.092528
Chromosome:chromosome 3
Location:8139615
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g200650 CHI2 (1 of 1) K17525 - chitinase domain-containing protein 1 (CHID1); Chitinase-like hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCGCACACTGCGCTTGGTCCTTGTCCC
Internal bar code:AAGTGGACGAGGTCCGGGCAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:219
LEAP-Seq percent confirming:43.7143
LEAP-Seq n confirming:306
LEAP-Seq n nonconfirming:394
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCCTTGTCGGGATACATT
Suggested primer 2:AGAGCCGTGGCTCGTTACTA