Insertion junction: LMJ.RY0402.092601_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.092601
Chromosome:chromosome 5
Location:311963
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre05.g233450 ELG30 (1 of 34) 2.4.2.41 - Xylogalacturonan beta-1,3-xylosyltransferase / Xylogalacturonan xylosyltransferase; Exostosin-like glycosyltransferase 30 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATCGGTAACAACGCGTCTGCTATACCAC
Internal bar code:TGCAGACCCACATGGCATGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:43
LEAP-Seq percent confirming:96.7646
LEAP-Seq n confirming:3918
LEAP-Seq n nonconfirming:131
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCGGCTTCTTCTCTGTGG
Suggested primer 2:TCCCCTATCACAGAACTCCG