Insertion junction: LMJ.RY0402.092604_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.092604
Chromosome:chromosome 10
Location:3994830
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre10.g448900 (1 of 80) IPR003882 - Pistil-specific extensin-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGTTAGAAACAGCCGTGCGGGCGCGCGG
Internal bar code:CACGCTCATAACCTTTAGGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:642
LEAP-Seq percent confirming:97.955
LEAP-Seq n confirming:479
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGAAATCACCGAAAGGTT
Suggested primer 2:AAGTTCGAGCCAAGCAAAAA