Insertion junction: LMJ.RY0402.092621_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.092621
Chromosome:chromosome 7
Location:4933565
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre07.g346500 (1 of 7) IPR000104//IPR020683 - Antifreeze protein, type I // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCGCCGCTGCTCTGTACTGCTGCCGCGG
Internal bar code:GCGAACCAGACGAGGCATCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:63
LEAP-Seq percent confirming:98.9803
LEAP-Seq n confirming:3009
LEAP-Seq n nonconfirming:31
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCCCAAGTGAGACAAAGC
Suggested primer 2:CTGGTGTCAATGTACGGAGC