Insertion junction: LMJ.RY0402.092766_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.092766
Chromosome:chromosome 3
Location:6415039
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g194450 CGL24 Conserved in the Green Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCGCGGCAGTCACACTAGCTGCTGTCCG
Internal bar code:GTGAAGGGCTAGTTGTGCCCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:235
LEAP-Seq percent confirming:98.2962
LEAP-Seq n confirming:1500
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAATTTCATTACGCTGGT
Suggested primer 2:ACGCTCAATCCATAGCATCC