Insertion junction: LMJ.RY0402.092767_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.092767
Chromosome:chromosome 3
Location:6125247
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g191800 (1 of 33) PF13855 - Leucine rich repeat (LRR_8) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACACATGCATGGATCCAAAACATAACGAT
Internal bar code:CGGTACAAGCTCCCGCGGTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:459
LEAP-Seq percent confirming:84.0939
LEAP-Seq n confirming:1290
LEAP-Seq n nonconfirming:244
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGGACGAGTGTGAGATGC
Suggested primer 2:GCAGTTTCCTGAGGTTGAGC