Insertion junction: LMJ.RY0402.092781_4

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.092781
Chromosome:chromosome 13
Location:3653422
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre13.g588736 (1 of 10) IPR000104//IPR001810 - Antifreeze protein, type I // F-box domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGGCGACTGTAATTGTAAATGAGGCCTG
Internal bar code:AGTTCTAAGCGGGCAAGTCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:348
LEAP-Seq percent confirming:37.6676
LEAP-Seq n confirming:3372
LEAP-Seq n nonconfirming:5580
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGTTGTTGTTGCTGCTGT
Suggested primer 2:TGGACTATGTGGCTCAGCAG