Insertion junction: LMJ.RY0402.092793_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.092793
Chromosome:chromosome 4
Location:2771083
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre04.g223750 (1 of 1) IPR000048//IPR009071//IPR027417 - IQ motif, EF-hand binding site // High mobility group box domain // P-loop containing nucleoside triphosphate hydrolase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACCTTTAGCGCTCCATTTCGTGGGCAAG
Internal bar code:GGATCTGTCGGGTCGGTATTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:366
LEAP-Seq percent confirming:98.493
LEAP-Seq n confirming:5490
LEAP-Seq n nonconfirming:84
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGTGTGTTCTTCCGTCAC
Suggested primer 2:TAGCTGGCAACATCAACAGC