Insertion junction: LMJ.RY0402.092914_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.092914
Chromosome:chromosome 9
Location:6273333
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g406432 CDS|outside_mRNA
Cre09.g406448 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAGCAGCGAGTTCACCTGCACGTGCCCGC
Internal bar code:CGGGTCCGCAAGGGAGGGCGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:532
LEAP-Seq percent confirming:99.4921
LEAP-Seq n confirming:4310
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGGGAGCTATTAGGCGTG
Suggested primer 2:CTTATGTTGCGGCGGTTATT