Insertion junction: LMJ.RY0402.093037_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.093037
Chromosome:chromosome 11
Location:332299
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre11.g467568 (1 of 1) K06276 - 3-phosphoinositide dependent protein kinase-1 (PDPK1) 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCGTGCCGGTAGCTGCAAAGGGTGCAAG
Internal bar code:CGGCTTACGCAGGCGGGCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:396
LEAP-Seq percent confirming:99.0327
LEAP-Seq n confirming:13310
LEAP-Seq n nonconfirming:130
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:GGGCGCTCACATGAATCTAT
Suggested primer 2:TTTTTAAGTTGGCCGGACTG