Insertion junction: LMJ.RY0402.093231_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.093231
Chromosome:chromosome 15
Location:413254
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre15.g636176 (1 of 10) IPR000104//IPR001810 - Antifreeze protein, type I // F-box domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAACAGATGCGGCCGGGGCCCGGGCCGGGG
Internal bar code:GAGATACGAAATGTACAGGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:80
LEAP-Seq percent confirming:97.6471
LEAP-Seq n confirming:166
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCCTTCCTGATTGAAACC
Suggested primer 2:TCTTCCTCCTCCTCCTCCTC