Insertion junction: LMJ.RY0402.093601_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.093601
Chromosome:chromosome 3
Location:7437313
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g205850 MAE6,MFT6 MATE efflux family protein; (1 of 3) PTHR11206//PTHR11206:SF95 - MULTIDRUG RESISTANCE PROTEIN // MULTI ANTIMICROBIAL EXTRUSION FAMILY PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGACGCGGTCACGGCCAAGGTGCGGGAC
Internal bar code:GGTTAGTCGCTAGCTCGAACGC

Confirmation - LEAP-Seq

LEAP-Seq distance:54
LEAP-Seq percent confirming:99.8655
LEAP-Seq n confirming:10394
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ACACCAGGACCAGACCGTAG
Suggested primer 2:GAGTTTAACCTCGGGCATGA