Insertion junction: LMJ.RY0402.094617_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.094617
Chromosome:chromosome 3
Location:3867776
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g171000 (1 of 1) IPR003072//IPR006569//IPR008942 - Orphan nuclear receptor, NOR1 type // CID domain // ENTH/VHS intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCCTGAGCTCGCCCCGCTTCCCTTCCCG
Internal bar code:TAGCTCGTGTACCATGACGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:452
LEAP-Seq percent confirming:69.7238
LEAP-Seq n confirming:1893
LEAP-Seq n nonconfirming:822
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGGGCGTTTCCTACACCT
Suggested primer 2:AACAATGTGGGAACGAGAGG