Insertion junction: LMJ.RY0402.094798_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.094798
Chromosome:chromosome 5
Location:2783924
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre05.g237050 CGLD27 Conserved in the Green Lineage and Diatoms; (1 of 1) PTHR34214:SF3 - GB|AAC18972.1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGACCCTACCCCGCACCTCTTCCTCCCCC
Internal bar code:ATATGGAGCTGTTCGCCGCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:254
LEAP-Seq percent confirming:61.5444
LEAP-Seq n confirming:1594
LEAP-Seq n nonconfirming:996
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTCAAGTGGAATTACGGT
Suggested primer 2:TCCCAGAATTCCAGGTATCG