Insertion junction: LMJ.RY0402.094920_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.094920
Chromosome:scaffold 36
Location:6198
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre36.g759597 (1 of 2) IPR001841//IPR013083//IPR024766 - Zinc finger, RING-type // Zinc finger, RING/FYVE/PHD-type // Zinc finger, RING-H2-type 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCCGACATTCAATTTGCAACGTCAAGGC
Internal bar code:GGTTCGTTACTGGGGATGTGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1340
LEAP-Seq percent confirming:97.6789
LEAP-Seq n confirming:3030
LEAP-Seq n nonconfirming:72
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:AGACATGATGACGGCTTTCC
Suggested primer 2:AGCTGTGTGTGAGGCAGATG