Insertion junction: LMJ.RY0402.094988_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.094988
Chromosome:chromosome 8
Location:4214014
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre08.g380452 (1 of 12) 2.7.11.22//2.7.11.23 - Cyclin-dependent kinase / Cdk-activating protein kinase // [RNA-polymerase]-subunit kinase / CTD kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCACCCCCACACACGCACACCACGCCTT
Internal bar code:TCAACTGCGATTCAAAAGCCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:267
LEAP-Seq percent confirming:31.1202
LEAP-Seq n confirming:1214
LEAP-Seq n nonconfirming:2687
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:ACGACCTGGCCAATGTCTAC
Suggested primer 2:ATACGCATAGCCAAACCAGG