Insertion junction: LMJ.RY0402.095658_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.095658
Chromosome:chromosome 8
Location:4195356
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre08.g380201 SHKD1 (1 of 1) 4.2.1.10 - 3-dehydroquinate dehydratase; Putative dehydroquinate dehydratase/shikimate:NADP oxidoreductase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAGGCCAAACCTCCTGCGCTCCCTGTGG
Internal bar code:CGTCTTGCACTGGTGGCAGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:426
LEAP-Seq percent confirming:27.6699
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:149
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGTGTAGTGTGCGTGTTT
Suggested primer 2:AAGCCTGAAGAACGAGTGGA