Insertion junction: LMJ.RY0402.095799_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.095799
Chromosome:chromosome 8
Location:4843388
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre08.g384600 (1 of 2) 3.1.1.81 - Quorum-quenching N-acyl-homoserine lactonase / Quorum-quenching N-acyl homoserine lactone hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGGTGGTGGGACAGTGACAGTATATGCG
Internal bar code:AAATGGTTACCGGGCCTCTCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:263
LEAP-Seq percent confirming:64.6868
LEAP-Seq n confirming:2592
LEAP-Seq n nonconfirming:1415
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TTGACAAAGTCCAGCGACAG
Suggested primer 2:CAAGAACATGAGCAGCTTCG