Insertion junction: LMJ.RY0402.096016_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.096016
Chromosome:chromosome 3
Location:2969832
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g163500 EX1,CGLD21 Executer 1, chloroplastic; (1 of 1) PTHR33917//PTHR33917:SF1 - FAMILY NOT NAMED // PROTEIN EXECUTER 1, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGACCCACGCGATGCGAACACTGCATAA
Internal bar code:GTGGGGTCTTCGTAGCCTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:307
LEAP-Seq percent confirming:98.8717
LEAP-Seq n confirming:701
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGGACTGACCCAAAGTCG
Suggested primer 2:GCTTCCTCATCCTGCTCAAC