Insertion junction: LMJ.RY0402.096151_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.096151
Chromosome:chromosome 6
Location:6837972
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre06.g295200 pCRY,PCRY1,CPH1 Plant-like Cryptochrome photoreceptor; (1 of 1) PTHR11455//PTHR11455:SF18 - CRYPTOCHROME // DEOXYRIBODIPYRIMIDINE PHOTO-LYASE, MITOCHONDRIAL 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCCACGATAAGAGGCTCGCATGGTCATA
Internal bar code:CGGCTCAGCGGCACGCCGAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:704
LEAP-Seq percent confirming:98.3345
LEAP-Seq n confirming:4074
LEAP-Seq n nonconfirming:69
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:GATCTTTGAGCTGTCGAGCC
Suggested primer 2:AAGAGGGCTACACCTGCTGA