Insertion junction: LMJ.RY0402.096313_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.096313
Chromosome:chromosome 3
Location:2416680
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g159100 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCAAGACCTCCTATGCCGATAGAGACCG
Internal bar code:CTAAGCGGACGCTGCTCTATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:224
LEAP-Seq percent confirming:66.0543
LEAP-Seq n confirming:827
LEAP-Seq n nonconfirming:425
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGTCCCTCCTTGTCATGT
Suggested primer 2:TATGTCTGTGCACGCCTCTC