Insertion junction: LMJ.RY0402.096313_4

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.096313
Chromosome:chromosome 13
Location:2388878
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre13.g579550 CGL27 Conserved in the Green Lineage; (1 of 5) IPR002645 - STAS domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCATTTACAGCAGGCTACCAGCCTTCATG
Internal bar code:TACATACATAAAGTTTAAGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:353
LEAP-Seq percent confirming:99.8314
LEAP-Seq n confirming:592
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGTGGACAGGGAGGTTTG
Suggested primer 2:TAGGAAGAAGAGGGGGAGGA