Insertion junction: LMJ.RY0402.096348_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.096348
Chromosome:chromosome 4
Location:3939187
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre04.g231222 CPN60A,CPN60 alpha Chaperonin 60A; (1 of 1) PTHR11353:SF11 - CHAPERONIN 60 SUBUNIT ALPHA 1, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAAAGGTGGGTAACACGCGTGTGTCTCAG
Internal bar code:GTGATGGAGTTGCTACTCACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:574
LEAP-Seq percent confirming:89.4134
LEAP-Seq n confirming:625
LEAP-Seq n nonconfirming:74
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CTAGGAGGGGGTGGAGGTAG
Suggested primer 2:CTGATGGCAGCGACTACAAA