Insertion junction: LMJ.RY0402.096465_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.096465
Chromosome:chromosome 16
Location:291008
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre16.g694201 (1 of 1) PTHR12461//PTHR12461:SF46 - HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED // SUBFAMILY NOT NAMED; Cupin- Jumonji-like protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCTGAGCCGCTGCTGAGCCTGGCTGCGG
Internal bar code:TGGGGTGCCCCCCGTTAGAACC

Confirmation - LEAP-Seq

LEAP-Seq distance:93
LEAP-Seq percent confirming:54.3632
LEAP-Seq n confirming:461
LEAP-Seq n nonconfirming:387
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CACACACCTGTACCTCACGG
Suggested primer 2:ATTGCGGCTACACACCTACC