Insertion junction: LMJ.RY0402.096515_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.096515
Chromosome:chromosome 2
Location:5449819
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre02.g107700 (1 of 2) IPR001611//IPR001810//IPR003591 - Leucine-rich repeat // F-box domain // Leucine-rich repeat, typical subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTGCCGCCTCCCGGCAGCTGCCGGCCAA
Internal bar code:CTCAAGTTCGATTCCACATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:68
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGACCGGTTCGGAACTAC
Suggested primer 2:GATGGTCTCCCTGCCATAGA