Insertion junction: LMJ.RY0402.096640_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.096640
Chromosome:chromosome 5
Location:3072521
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre05.g238950 CGLD33 (1 of 5) 2.1.1.34 - tRNA (guanosine(18)-2'-O)-methyltransferase / tRNA (Gm18) methyltransferase; Conserved in the Green Lineage and Diatoms intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGCTCCAACATGGGGATCCACGCCTGCC
Internal bar code:GTGTGCAGGGGGAAGCAATTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:366
LEAP-Seq percent confirming:96.3578
LEAP-Seq n confirming:17461
LEAP-Seq n nonconfirming:660
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GGGCTTGACTTCACAGAAGC
Suggested primer 2:CACACACACACACACACGGT