Insertion junction: LMJ.RY0402.096696_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.096696
Chromosome:chromosome_9
Location:6863033
Confidence (%):58
Locus systematic id Locus common name Defline Orientation Feature
Cre09.g410050 antisense 3'UTR

Insertion site details

Flanking sequence (orientation from cassette outwards):GTAAGCTTCATAAATGCATGTGAGGGCAGG
Internal bar code:TCGGCCAGCTTGGGAACGACAC

Confirmation - LEAP-Seq

LEAP-Seq distance:171
LEAP-Seq percent confirming:67.1416
LEAP-Seq n confirming:7021
LEAP-Seq n nonconfirming:3436
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGTCCTCTCCAGCACACA
Suggested primer 2:CCACCTTTGTCGTGTACGTG