Insertion junction: LMJ.RY0402.097277_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.097277
Chromosome:chromosome 3
Location:3867615
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g171000 (1 of 1) IPR003072//IPR006569//IPR008942 - Orphan nuclear receptor, NOR1 type // CID domain // ENTH/VHS intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCTACATCGTTTTGCGCATGAGCACACG
Internal bar code:CGGCTTCAATAGTTGGTGAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1106
LEAP-Seq percent confirming:99.4852
LEAP-Seq n confirming:23576
LEAP-Seq n nonconfirming:122
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:AACAATGTGGGAACGAGAGG
Suggested primer 2:AAAGGGCGTTTCCTACACCT