Insertion junction: LMJ.RY0402.097279_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.097279
Chromosome:chromosome 10
Location:3640785
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre10.g445650 SMC3 (1 of 1) K06669 - structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6) (SMC3, CSPG6); Structural Maintenance of Chromosomes protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTGTGTTCTTTCCCGCTTTCCCCATTCG
Internal bar code:CACCGTAGGAAAGATCGACTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:466
LEAP-Seq percent confirming:99.5238
LEAP-Seq n confirming:209
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TACTGCTGCTCATAATGCGG
Suggested primer 2:CGGCATGCATACGACTAATG